Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010783.1 Corchorus olitorius cultivar O-4 contig10815, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8407

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
442--479
11
3.5
11
85
10
51
57
2
0
39
1.12
801--859
29
2.1
29
84
9
77
32
1
10
55
1.43
3330--3418
45
2.0
45
88
2
135
19
33
5
41
1.74
5652--5862
104
2.0
104
100
0
422
35
15
9
39
1.79
5679--5840
52
3.1
52
61
16
127
35
15
11
37
1.83
6039--6078
15
2.6
16
88
4
55
62
12
10
15
1.54
7933--7984
3
17.3
3
100
0
104
67
0
0
32
0.91
7995--8032
20
1.9
20
88
0
58
23
47
5
23
1.72

Tables:   1

The End!