Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010784.1 Corchorus olitorius cultivar O-4 contig10816, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17166

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--45
10
3.9
10
81
12
55
17
4
2
75
1.08
4--45
22
1.9
22
90
0
66
16
4
2
76
1.07
671--710
20
1.9
21
85
10
55
40
0
15
45
1.46
708--738
5
6.2
5
100
0
62
80
0
0
19
0.71
7368--7395
12
2.3
12
100
0
56
25
32
7
35
1.83
14791--15023
120
1.9
119
88
5
355
38
9
1
50
1.45

Tables:   1

The End!