Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010786.1 Corchorus olitorius cultivar O-4 contig10818, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26721

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7747--7832
14
6.1
14
80
0
64
25
2
19
52
1.58
7771--7832
7
8.9
7
89
0
70
24
1
20
53
1.55
7985--8062
33
2.4
33
93
0
129
34
6
15
43
1.72
8190--8737
54
10.2
54
91
3
863
37
21
14
27
1.92
8190--8737
215
2.5
216
92
1
895
37
21
14
27
1.92
8844--9375
37
14.4
37
79
5
511
44
15
16
22
1.86
9977--10015
20
1.9
21
89
5
62
53
2
17
25
1.56
10403--10472
30
2.5
28
82
15
90
1
15
1
81
0.84
11117--11164
14
3.5
14
86
13
73
39
10
10
39
1.74
11100--11164
28
2.4
26
82
14
78
38
9
9
43
1.69
11100--11164
14
4.8
13
81
12
69
38
9
9
43
1.69
19387--19545
34
4.8
34
92
2
261
22
27
20
28
1.99
24549--24664
60
1.9
59
87
5
171
32
15
19
31
1.93
25939--26008
36
1.9
36
91
0
113
21
10
8
60
1.55

Tables:   1

The End!