Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010795.1 Corchorus olitorius cultivar O-4 contig10827, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10248

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5787--5985
109
1.8
109
95
0
362
27
22
16
34
1.95
5936--6284
142
2.4
144
91
2
549
28
19
17
34
1.94
6310--6380
37
1.9
37
91
0
115
21
23
15
39
1.91
6358--6619
71
3.4
78
75
13
179
29
21
11
38
1.88
6417--6657
40
6.4
37
75
14
183
29
21
12
37
1.89
6451--6587
71
1.9
71
89
5
215
31
19
12
36
1.89
6522--6663
39
3.6
39
86
0
176
28
21
12
37
1.90
8484--8508
11
2.3
11
100
0
50
84
8
8
0
0.79

Tables:   1

The End!