Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010806.1 Corchorus olitorius cultivar O-4 contig10838, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25637

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3639--4519
40
21.9
40
78
7
720
36
20
26
16
1.94
4537--4648
43
2.6
43
92
0
179
33
19
28
18
1.96
5230--5470
50
4.8
51
77
9
226
41
14
3
40
1.64
5232--5481
100
2.5
101
81
7
267
39
15
3
41
1.65
11235--11295
30
2.0
30
100
0
122
16
32
13
37
1.87
15603--15730
66
1.9
66
87
3
186
57
13
23
6
1.59
16434--16512
39
2.0
39
95
0
140
31
16
21
30
1.95

Tables:   1

The End!