Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010812.1 Corchorus olitorius cultivar O-4 contig10844, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7214

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3264--3313
22
2.3
22
85
0
73
48
18
18
16
1.82
3667--3740
28
2.6
29
78
8
80
35
28
16
20
1.94
3995--4301
35
8.8
35
87
5
442
29
21
18
29
1.97
4317--4503
50
3.7
50
94
0
320
28
13
27
30
1.94
5371--5403
12
2.7
13
86
13
52
12
15
0
72
1.12

Tables:   1

The End!