Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010813.1 Corchorus olitorius cultivar O-4 contig10845, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14301

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1583--1632
21
2.4
21
89
0
73
16
48
24
12
1.79
1989--2018
15
2.1
14
93
6
51
13
16
6
63
1.50
4889--4930
15
2.7
15
85
3
57
14
9
14
61
1.55
5274--5322
21
2.3
23
82
13
68
6
6
16
71
1.27
5343--5387
24
1.9
24
90
4
74
46
8
17
26
1.78
5479--5511
13
2.5
13
90
0
57
6
6
12
75
1.16
11961--12099
72
1.9
72
81
5
165
28
20
17
33
1.95

Tables:   1

The End!