Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010826.1 Corchorus olitorius cultivar O-4 contig10858, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22840

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5644--5668
12
2.1
12
100
0
50
32
16
16
36
1.90
16066--16766
286
2.4
288
91
2
1127
32
12
21
33
1.91
17201--17250
24
2.1
24
88
0
73
48
12
18
22
1.80
17534--17642
45
2.4
45
81
4
130
40
18
14
26
1.89
19610--19637
2
14.0
2
100
0
56
50
0
0
50
1.00
20859--21140
97
2.9
97
86
3
379
34
10
15
39
1.81
22725--22778
2
27.5
2
96
3
101
50
0
50
0
1.00

Tables:   1

The End!