Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010842.1 Corchorus olitorius cultivar O-4 contig10874, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7279

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
524--682
27
5.9
26
83
4
90
36
23
16
23
1.94
563--682
27
4.4
27
87
1
159
36
22
17
23
1.94
1400--1470
16
4.5
15
72
18
63
8
14
35
42
1.75
1390--1475
32
2.7
32
81
3
93
8
16
34
40
1.78
1915--1986
31
2.3
31
75
13
76
61
8
4
26
1.43
2212--2242
14
2.2
14
100
0
62
41
0
9
48
1.36
2414--2455
22
1.9
22
85
0
57
42
26
16
14
1.86

Tables:   1

The End!