Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010847.1 Corchorus olitorius cultivar O-4 contig10879, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3851

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
630--1251
154
4.0
153
91
1
956
21
18
18
40
1.91
990--1464
262
1.8
262
90
1
765
22
19
19
39
1.92
836--1666
416
2.0
415
86
2
1177
22
18
18
40
1.91
682--1840
570
2.0
569
90
1
1813
21
18
19
40
1.91
1252--1820
154
3.7
154
86
2
822
21
18
19
40
1.91
2767--3847
154
7.0
154
94
0
1772
21
19
18
40
1.91
2763--3847
307
3.5
308
92
0
1771
21
19
18
40
1.92
2767--3851
461
2.4
460
92
0
1830
21
18
18
40
1.91

Tables:   1

The End!