Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010866.1 Corchorus olitorius cultivar O-4 contig10898, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18914

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
213--259
23
2.1
23
84
11
62
59
14
12
12
1.61
11524--11788
78
3.4
76
77
8
250
38
16
20
24
1.92
11524--11787
39
6.8
38
71
8
174
38
16
20
25
1.93
11739--11910
57
3.0
57
93
0
299
41
16
19
22
1.90
11814--11903
27
3.2
27
64
11
72
42
14
16
26
1.87
17563--17603
20
2.0
20
90
0
64
17
12
24
46
1.82
18577--18908
22
15.3
21
69
14
149
35
17
9
36
1.84

Tables:   1

The End!