Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010886.1 Corchorus olitorius cultivar O-4 contig10918, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7238

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2014--2057
22
2.0
22
100
0
88
22
31
18
27
1.97
2666--2709
22
2.0
22
100
0
88
36
9
36
18
1.82
3867--3923
19
3.0
19
100
0
114
52
10
21
15
1.72
4348--4392
22
2.0
22
100
0
90
13
31
13
42
1.82
5018--5045
14
2.0
14
100
0
56
35
7
21
35
1.81
6764--6803
20
2.0
20
100
0
80
30
20
10
40
1.85

Tables:   1

The End!