Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010920.1 Corchorus olitorius cultivar O-4 contig10952, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62829

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5515--5550
2
18.0
2
100
0
72
50
0
0
50
1.00
11080--11116
14
2.6
14
91
0
56
13
13
13
59
1.62
11381--11415
11
3.2
11
91
0
61
80
17
2
0
0.84
15404--15439
17
2.1
17
89
0
54
30
11
19
38
1.86
16196--16239
2
21.5
2
86
9
54
45
2
2
50
1.27
38679--38833
31
5.0
31
100
0
310
19
16
16
48
1.81
47500--47541
21
2.0
21
90
9
68
47
19
14
19
1.82

Tables:   1

The End!