Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010936.1 Corchorus olitorius cultivar O-4 contig10968, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4054

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
656--689
17
2.0
17
100
0
68
52
5
11
29
1.61
2197--2238
18
2.3
18
87
0
57
54
7
26
11
1.62
2875--2941
31
2.2
31
89
5
102
47
13
17
20
1.81
3009--3045
11
3.4
11
88
0
56
21
29
32
16
1.95
3073--3151
31
2.5
31
93
0
131
35
16
11
36
1.85
3071--3207
60
2.2
62
83
2
161
32
16
12
39
1.85
3071--3207
31
4.5
29
80
3
112
32
16
12
39
1.85

Tables:   1

The End!