Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010944.1 Corchorus olitorius cultivar O-4 contig10976, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27738

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6335--6408
34
2.5
28
74
21
69
29
9
22
37
1.86
6348--6415
34
2.0
33
97
2
127
27
14
23
33
1.94
6434--6503
35
2.0
35
97
0
131
27
30
14
28
1.95
6511--6628
61
1.9
61
100
0
236
18
11
7
61
1.53
12113--12521
207
2.0
208
91
0
667
31
11
18
38
1.86
13102--13156
23
2.4
23
90
0
92
36
7
25
30
1.83
15403--15438
17
2.2
17
90
5
56
11
25
2
61
1.43
16010--16060
17
3.1
16
83
8
57
21
19
21
37
1.95
16225--16307
2
43.0
2
76
20
72
49
3
1
45
1.27
16226--16301
27
2.7
27
84
11
98
48
3
1
46
1.29
16263--16308
9
5.1
9
82
10
58
56
0
0
43
0.99
16226--16307
29
2.8
29
80
14
96
50
3
1
45
1.27
19875--20192
168
1.9
162
84
3
420
32
14
22
31
1.93
24367--24401
2
17.5
2
100
0
70
48
0
0
51
1.00

Tables:   1

The End!