Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010947.1 Corchorus olitorius cultivar O-4 contig10979, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15869

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1895--2578
35
19.6
35
79
12
653
29
19
23
26
1.99
1895--2300
105
3.9
105
96
0
724
29
19
23
27
1.99
2277--2635
138
2.6
138
91
3
587
28
19
25
26
1.98
2597--2800
90
2.3
90
83
7
229
27
18
25
27
1.98
11922--12159
30
7.5
30
72
13
172
46
17
14
21
1.84

Tables:   1

The End!