Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010951.1 Corchorus olitorius cultivar O-4 contig10983, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4162

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1304--1333
11
2.7
11
100
0
60
43
0
10
46
1.37
2991--3136
76
2.0
73
84
4
193
36
10
19
32
1.87
3534--3558
8
3.1
8
100
0
50
76
0
12
12
1.04
3928--3969
20
2.1
20
90
0
66
73
2
11
11
1.18
3979--4042
21
2.8
22
79
18
69
76
12
0
10
1.02
3979--4053
16
4.8
16
69
16
50
74
13
0
12
1.07
3998--4048
20
2.5
20
81
9
59
78
11
0
9
0.97

Tables:   1

The End!