Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010991.1 Corchorus olitorius cultivar O-4 contig11023, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1820

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--340
154
2.2
154
90
1
538
23
17
18
40
1.92
147--528
193
2.0
193
93
1
649
22
17
19
40
1.91
340--682
153
2.2
153
93
1
580
21
17
19
41
1.90
1--1029
346
3.0
346
91
2
1688
22
18
19
40
1.91
494--873
191
2.0
192
91
2
613
23
17
18
40
1.91
686--1182
155
3.2
154
92
3
788
21
18
18
41
1.91
340--1682
500
2.7
499
93
1
2298
22
18
18
40
1.91
993--1375
193
2.0
193
92
2
644
22
18
18
40
1.91
838--1528
346
2.0
348
94
1
1217
21
18
18
40
1.91
1186--1818
154
4.1
154
91
0
1009
22
19
18
39
1.92
1186--1818
307
2.1
307
91
0
1025
22
19
18
39
1.92

Tables:   1

The End!