Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011020.1 Corchorus olitorius cultivar O-4 contig11053, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1119

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--561
154
3.6
153
90
2
883
42
18
18
20
1.90
490--630
69
2.1
69
91
1
230
42
14
24
18
1.88
336--783
222
2.0
222
94
0
788
42
18
19
19
1.89
183--931
376
2.0
376
93
1
1268
43
18
18
19
1.89
558--1119
154
3.7
154
91
1
887
41
19
18
20
1.90
28--1091
529
2.0
531
91
1
1742
42
18
18
20
1.89

Tables:   1

The End!