Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011054.1 Corchorus olitorius cultivar O-4 contig11087, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3065

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--378
154
2.5
153
88
3
564
42
16
19
21
1.89
272--488
106
2.1
105
87
2
310
42
16
18
23
1.89
118--641
258
2.0
260
89
2
813
41
17
18
22
1.91
378--1407
154
6.7
154
93
1
1585
41
19
17
21
1.91
1402--3058
154
10.7
154
89
1
2347
41
18
17
21
1.90
1402--3065
463
3.6
463
88
1
2426
41
18
17
21
1.91
1402--3058
617
2.7
616
89
1
2489
41
18
17
21
1.90

Tables:   1

The End!