Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011058.1 Corchorus olitorius cultivar O-4 contig11091, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1239

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--526
154
3.4
154
88
2
738
23
17
18
40
1.91
442--610
84
2.0
84
91
0
275
24
15
17
41
1.89
288--761
238
2.0
238
88
0
698
22
17
17
41
1.89
526--1237
154
4.6
154
90
2
1076
22
18
19
39
1.92
1--1071
545
2.0
545
90
2
1686
22
18
18
40
1.92
537--1237
307
2.3
306
90
3
1108
22
18
19
39
1.92

Tables:   1

The End!