Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001106.1 Corchorus olitorius cultivar O-4 contig01106, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1235

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16--382
54
6.8
53
83
6
384
29
22
20
27
1.98
348--828
35
13.6
35
89
3
615
42
18
12
26
1.86
348--828
174
2.7
176
86
4
700
42
18
12
26
1.86
348--828
209
2.3
211
85
4
664
42
18
12
26
1.86
827--1158
54
6.2
54
81
4
375
29
23
18
28
1.98
827--1145
161
2.0
161
85
5
430
29
23
19
27
1.98

Tables:   1

The End!