Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011121.1 Corchorus olitorius cultivar O-4 contig11154, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28972

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4637--4756
61
2.0
61
81
3
143
24
20
20
35
1.96
14743--14783
18
2.3
18
95
4
75
21
19
17
41
1.90
17649--17683
2
17.5
2
100
0
70
51
0
48
0
1.00
19824--19860
2
19.5
2
89
10
60
51
0
48
0
1.00
24133--24174
15
2.8
15
85
0
66
30
26
7
35
1.83
24326--24366
20
2.0
20
100
0
82
39
19
26
14
1.90

Tables:   1

The End!