Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011179.1 Corchorus olitorius cultivar O-4 contig11212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4788

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
659--1367
154
4.6
154
91
1
1122
40
18
19
21
1.92
1262--1461
109
1.8
109
94
0
355
45
15
17
22
1.85
2565--2611
26
1.9
24
87
12
69
27
27
4
40
1.75
3508--3539
15
2.1
15
94
0
55
46
28
9
15
1.77
4124--4250
66
1.9
66
85
3
175
25
7
22
43
1.80
4136--4265
33
3.9
33
76
4
129
26
7
21
44
1.79

Tables:   1

The End!