Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011181.1 Corchorus olitorius cultivar O-4 contig11214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30697

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3659--3696
2
19.0
2
100
0
76
50
0
0
50
1.00
7252--7286
10
3.4
10
84
7
52
77
0
17
5
0.96
7251--7286
11
3.4
11
84
7
56
77
0
16
5
0.94
12848--12879
2
16.0
2
100
0
64
50
0
0
50
1.00
13909--13958
18
2.7
18
88
11
75
86
0
14
0
0.58
13912--13957
23
2.0
24
95
4
85
84
0
15
0
0.62
13909--13959
19
2.7
18
88
8
75
86
0
13
0
0.58
27475--27517
14
3.1
14
72
0
50
16
9
23
51
1.73
28231--28260
15
2.0
15
93
0
51
16
23
13
46
1.82
28595--28668
36
2.1
36
100
0
148
32
13
20
33
1.91

Tables:   1

The End!