Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011193.1 Corchorus olitorius cultivar O-4 contig11226, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20698

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1897--1980
44
1.9
44
82
0
105
38
13
15
33
1.86
1938--2130
22
8.8
22
72
8
133
40
10
13
35
1.79
2391--2470
22
3.6
22
81
0
88
31
15
12
41
1.84
2293--2469
44
4.0
44
74
6
153
33
13
16
36
1.88
3333--3408
38
2.0
38
90
7
120
43
1
9
46
1.44
3927--3956
2
15.0
2
100
0
60
50
0
0
50
1.00
4907--4982
27
2.8
27
91
0
116
17
7
52
22
1.70
4969--5003
18
1.9
18
94
0
61
8
20
51
20
1.73
16973--17249
138
2.0
138
97
0
527
44
10
23
21
1.83
17317--17422
28
3.7
28
88
3
140
27
5
30
36
1.80

Tables:   1

The End!