Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011199.1 Corchorus olitorius cultivar O-4 contig11232, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6812

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1405--1453
21
2.4
20
83
6
62
48
8
18
24
1.75
1551--1623
27
2.6
28
80
6
87
42
28
13
15
1.85
1900--2058
52
3.1
52
97
1
295
28
26
10
33
1.90
2070--2252
50
3.7
49
86
5
251
28
12
29
29
1.93
2777--2925
50
3.0
50
89
0
235
36
14
16
32
1.90
3523--3648
5
26.6
5
70
26
80
16
2
15
65
1.37
3523--3643
24
5.3
24
73
24
102
16
2
14
66
1.37
3530--3657
43
3.1
41
87
10
181
16
2
14
66
1.36
3616--3658
12
3.5
12
80
3
50
13
2
11
72
1.22

Tables:   1

The End!