Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011204.1 Corchorus olitorius cultivar O-4 contig11237, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22135

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79--135
25
2.3
25
87
3
80
22
15
3
57
1.53
79--143
24
2.7
25
85
4
80
21
13
3
61
1.46
4273--4377
44
2.4
44
82
3
122
39
12
13
35
1.82
4274--4378
22
4.8
22
75
6
88
39
12
12
36
1.81
7213--7308
18
5.3
18
74
0
84
20
25
23
30
1.99
7227--7308
36
2.3
36
97
0
155
21
23
25
29
1.99
19560--19674
56
2.1
56
94
0
203
52
10
21
15
1.73
19574--19664
28
3.3
27
66
17
69
51
10
21
15
1.74
20389--20421
17
1.9
17
93
0
57
30
9
21
39
1.84

Tables:   1

The End!