Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011231.1 Corchorus olitorius cultivar O-4 contig11264, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13089

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1993--2024
15
2.1
15
100
0
64
81
0
18
0
0.70
1982--2024
14
3.0
14
86
6
59
74
0
25
0
0.82
4571--4665
42
2.3
42
89
8
142
25
24
9
41
1.85
6309--6353
17
2.9
15
81
18
56
64
17
0
17
1.29
6307--6353
22
2.1
23
96
4
87
65
17
0
17
1.27
6647--6675
8
3.6
8
100
0
58
89
0
0
10
0.48
6961--7401
50
8.8
50
94
0
720
34
16
12
37
1.86
8006--8140
50
2.7
50
84
1
180
28
25
15
30
1.96
8158--8427
35
7.7
34
87
6
364
30
19
21
29
1.97
8158--8427
105
2.6
105
89
3
420
30
19
21
29
1.97
8876--8928
26
2.0
26
92
0
88
20
13
26
39
1.89
11450--11490
14
2.9
14
92
0
64
73
0
26
0
0.84

Tables:   1

The End!