Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011235.1 Corchorus olitorius cultivar O-4 contig11268, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6159

Tables:   1   

This is table  1  of  1  ( 3 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
816--912
27
3.7
26
88
4
140
16
18
25
39
1.91
1395--1438
15
2.8
16
82
6
63
52
6
15
25
1.68
4585--4661
27
2.9
27
86
0
109
20
16
22
40
1.91

Tables:   1

The End!