Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011238.1 Corchorus olitorius cultivar O-4 contig11271, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11254

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
723--747
2
12.5
2
100
0
50
52
0
0
48
1.00
2992--3022
16
1.9
16
93
0
53
22
12
25
38
1.90
8065--8115
25
2.0
25
88
0
75
35
25
11
27
1.91
8453--8536
27
3.1
27
78
8
91
41
25
14
19
1.88
8817--8850
15
2.3
15
89
0
50
26
11
0
61
1.30

Tables:   1

The End!