Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011242.1 Corchorus olitorius cultivar O-4 contig11275, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11311

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3779--3819
19
2.2
19
100
0
82
19
21
19
39
1.93
4215--4243
13
2.3
13
94
5
51
0
13
0
86
0.58
4214--4246
17
2.0
16
94
5
57
0
15
0
84
0.61
5624--5651
13
2.2
13
100
0
56
50
21
14
14
1.78
5980--6196
111
2.0
111
95
1
391
25
22
14
37
1.92

Tables:   1

The End!