Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011267.1 Corchorus olitorius cultivar O-4 contig11300, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23456

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
279--314
19
1.9
18
88
5
54
27
22
8
41
1.82
6028--6057
11
2.7
11
94
0
51
50
0
0
50
1.00
6028--6058
15
2.1
15
93
0
53
48
0
0
51
1.00
16413--16962
305
1.8
305
88
0
850
29
20
19
30
1.97
17868--17905
11
3.5
11
89
10
51
39
0
2
57
1.12
21929--21963
6
5.7
6
93
3
52
40
11
0
48
1.39
22219--22285
21
3.2
21
66
16
57
52
11
1
34
1.48
22400--22813
203
2.0
203
92
4
681
36
11
8
44
1.70

Tables:   1

The End!