Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011277.1 Corchorus olitorius cultivar O-4 contig11310, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8691

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
474--508
15
2.3
15
90
9
54
60
0
2
37
1.12
965--1054
31
2.9
31
83
0
108
23
23
20
33
1.97
5700--5835
22
6.2
22
76
5
132
37
16
8
36
1.80
5720--5835
43
2.7
44
82
8
137
38
16
8
36
1.79
5897--6115
22
10.0
22
75
9
137
35
14
11
38
1.82
5971--6115
44
3.3
44
78
7
152
35
13
11
40
1.79
5979--6115
43
3.1
43
77
9
143
35
13
10
40
1.79
7377--7424
22
2.2
22
85
7
62
43
10
20
25
1.83
8559--8614
29
2.0
28
92
3
94
39
21
10
28
1.87

Tables:   1

The End!