Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011278.1 Corchorus olitorius cultivar O-4 contig11311, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29843

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1103--1136
17
2.0
17
94
0
59
79
0
14
5
0.91
1104--1137
11
3.0
11
87
8
50
82
0
14
2
0.79
14264--14305
23
1.9
21
90
9
66
57
2
0
40
1.12
14619--14698
29
2.7
30
82
3
90
28
16
12
42
1.84
14822--14917
31
3.1
31
95
0
165
42
11
14
31
1.81
15530--15769
126
1.9
126
84
5
324
35
10
1
52
1.44
15913--16000
31
2.9
31
88
3
126
29
13
13
43
1.83
16144--16217
29
2.5
31
84
4
89
44
10
17
27
1.82
16374--16433
31
1.9
32
86
3
86
46
5
15
33
1.67
19274--19316
4
10.8
4
100
0
86
0
25
0
74
0.82
20315--20348
13
2.5
14
95
4
61
0
20
0
79
0.73
27544--27613
32
2.2
31
80
14
81
58
17
11
12
1.63

Tables:   1

The End!