Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011287.1 Corchorus olitorius cultivar O-4 contig11320, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53427

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22078--22199
65
1.9
65
82
3
156
36
6
12
45
1.68
22100--22199
22
4.6
22
82
2
103
37
7
13
43
1.71
29985--30103
57
2.1
57
92
3
195
26
14
29
29
1.95
32455--33342
434
2.0
435
85
3
1196
40
13
15
31
1.85
33609--33934
178
1.8
178
83
4
433
37
15
13
33
1.86
37475--37515
7
6.0
7
83
16
59
14
0
0
85
0.60
37477--37517
14
3.0
14
96
3
75
14
0
0
85
0.60
50890--50958
32
2.2
31
82
5
84
27
15
17
39
1.90
50991--51087
31
3.2
31
89
2
135
32
16
20
29
1.95
51001--51094
29
3.2
29
86
3
116
31
15
20
31
1.94

Tables:   1

The End!