Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011291.1 Corchorus olitorius cultivar O-4 contig11324, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20566

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--27
1
27.0
1
100
0
54
0
0
0
100
0.00
13535--13579
4
11.0
4
95
4
81
0
24
0
75
0.80
13536--13594
12
5.1
12
90
8
70
0
16
0
83
0.66
20373--20411
14
2.8
14
88
7
53
64
2
10
23
1.37
20302--20468
85
2.0
85
93
0
289
50
2
12
34
1.53
20483--20544
31
2.0
31
96
0
115
43
6
20
29
1.77

Tables:   1

The End!