Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011295.1 Corchorus olitorius cultivar O-4 contig11328, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2902

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59--112
26
2.1
26
89
6
83
38
25
20
14
1.91
523--573
25
2.0
25
88
0
75
35
25
11
27
1.91
910--963
27
2.0
27
92
3
92
42
29
11
16
1.83
1461--2181
30
24.0
30
88
1
1016
43
17
17
21
1.88
2443--2894
36
13.0
35
80
9
442
40
19
21
19
1.92
2510--2898
71
5.5
70
84
6
453
40
19
21
18
1.91

Tables:   1

The End!