Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011305.1 Corchorus olitorius cultivar O-4 contig11338, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17783

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
246--305
26
2.4
26
94
5
106
10
28
10
51
1.67
1443--1468
13
2.0
13
100
0
52
46
38
15
0
1.46
1947--2156
28
7.5
28
91
0
330
43
24
16
14
1.86
2571--2601
2
15.5
2
93
0
53
51
3
0
45
1.17
3828--3856
1
29.0
1
100
0
58
0
0
0
100
0.00
5099--5176
40
2.0
40
100
0
156
30
16
15
37
1.90
10017--10128
29
3.6
29
80
17
134
30
22
26
20
1.98
10003--10128
66
1.9
66
96
0
234
30
21
26
21
1.98

Tables:   1

The End!