Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011310.1 Corchorus olitorius cultivar O-4 contig11343, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3299

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
875--1313
36
12.3
35
81
5
434
19
19
17
43
1.89
902--1313
71
5.8
71
82
4
427
18
19
17
43
1.88
875--1314
107
4.1
107
86
3
548
19
20
17
42
1.89
902--1313
143
2.9
143
83
2
497
18
19
17
43
1.88
1576--2063
30
16.2
30
82
3
523
21
14
17
46
1.83
2490--2574
29
2.9
29
87
0
125
18
15
24
41
1.89
2796--2859
30
2.1
30
97
0
119
29
6
23
40
1.79

Tables:   1

The End!