Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011318.1 Corchorus olitorius cultivar O-4 contig11351, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2930

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
614--675
21
2.9
21
88
7
81
0
22
0
77
0.77
624--675
21
2.3
24
90
9
83
0
21
0
78
0.74
975--1028
6
8.7
6
86
10
56
18
20
0
61
1.35
975--1022
13
3.7
13
77
8
53
18
20
0
60
1.36
1441--1470
15
1.9
16
93
6
53
0
16
3
80
0.85

Tables:   1

The End!