Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011354.1 Corchorus olitorius cultivar O-4 contig11387, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18081

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2000--2045
20
2.3
20
100
0
92
10
54
23
10
1.67
7051--7086
19
1.9
18
88
5
54
44
0
25
30
1.54
8358--8399
22
1.9
22
90
0
66
19
9
4
66
1.38
11496--11522
12
2.2
12
100
0
54
37
7
7
48
1.59
15262--15355
40
2.3
41
81
1
118
43
13
15
26
1.85
17642--17691
22
2.3
22
96
0
91
52
18
16
14
1.76

Tables:   1

The End!