Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011411.1 Corchorus olitorius cultivar O-4 contig11444, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16840

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
120--153
9
3.9
9
88
7
52
47
0
17
35
1.48
6891--6948
30
2.0
30
93
3
100
22
24
10
43
1.84
6995--7078
42
2.0
42
100
0
168
30
30
21
16
1.95
13434--13458
12
2.1
12
100
0
50
0
8
0
92
0.40
13544--14200
349
1.9
352
89
1
1025
36
14
19
30
1.91
14192--14230
20
2.0
20
94
0
69
53
0
7
38
1.30
15959--15989
15
2.1
15
93
0
53
77
0
9
12
0.99

Tables:   1

The End!