Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011417.1 Corchorus olitorius cultivar O-4 contig11450, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6031

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--327
154
2.1
154
93
0
535
21
18
20
40
1.92
266--391
64
2.0
64
96
0
234
21
19
15
44
1.86
112--545
218
2.0
218
92
0
715
21
18
18
41
1.90
327--1486
154
7.5
154
92
1
1831
21
17
19
41
1.91
3--699
372
1.9
372
90
0
1108
21
18
19
40
1.91
3336--6031
154
17.5
153
90
1
3885
23
18
19
39
1.92
3336--6031
769
3.5
765
88
3
3969
23
18
19
39
1.92

Tables:   1

The End!