Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011421.1 Corchorus olitorius cultivar O-4 contig11454, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10247

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
157--304
33
4.5
32
80
9
138
26
9
21
42
1.83
1243--1284
21
2.0
21
95
0
75
33
26
19
21
1.97
5943--6023
33
2.5
33
81
4
83
23
9
24
41
1.84
6934--7083
33
4.5
33
78
8
119
44
18
8
28
1.79
8622--8668
26
1.9
24
87
12
69
40
4
27
27
1.75
9455--10247
156
5.1
154
87
3
1049
23
18
17
39
1.91
9455--10239
309
2.5
308
85
4
1060
23
18
17
40
1.91

Tables:   1

The End!