Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011429.1 Corchorus olitorius cultivar O-4 contig11462, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4598

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2410
154
15.8
153
88
1
3402
41
19
18
21
1.90
5--4598
308
14.7
305
78
9
4290
41
19
18
21
1.91
1--2410
306
7.9
307
89
2
3383
41
19
18
21
1.90
2321--2499
88
2.0
89
94
3
317
42
15
18
22
1.89
2167--2653
243
2.0
242
90
2
762
41
16
18
23
1.90
2409--4598
154
14.1
154
90
1
3333
40
19
18
21
1.91

Tables:   1

The End!