Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011439.1 Corchorus olitorius cultivar O-4 contig11472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7947

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3069--3126
23
2.7
21
75
15
55
53
15
13
17
1.73
3256--3301
24
1.9
24
95
0
83
17
19
34
28
1.94
3817--4175
180
2.0
177
89
2
540
36
10
2
50
1.50
4420--4516
32
3.1
30
82
7
104
34
13
12
40
1.82
4659--4733
29
2.5
29
82
10
89
41
10
21
26
1.86
5539--5579
20
2.0
20
100
0
82
24
0
14
60
1.34
6354--6380
13
2.1
13
100
0
54
7
7
7
77
1.12
7356--7408
3
17.7
3
100
0
106
32
0
0
67
0.91

Tables:   1

The End!