Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011441.1 Corchorus olitorius cultivar O-4 contig11474, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23525

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1503--1538
10
3.7
10
88
3
56
33
36
0
30
1.58
2324--2363
15
2.6
16
92
4
64
15
7
12
65
1.47
3830--4453
137
4.6
136
84
5
759
38
19
9
31
1.84
3830--4430
267
2.2
267
84
4
751
39
19
9
31
1.84
4676--4757
42
2.0
42
92
4
139
26
15
9
47
1.77
7457--7526
28
2.5
28
97
0
131
27
25
30
17
1.97
8545--8596
4
12.8
4
93
2
50
48
9
1
40
1.47
8553--8601
8
6.0
8
87
2
53
48
12
2
36
1.52
8550--8595
12
3.8
12
85
0
56
50
10
0
39
1.38
8653--8689
12
3.1
12
88
0
56
21
48
0
29
1.50
11824--11891
35
1.9
35
96
0
127
47
22
7
23
1.76
15004--15083
32
2.5
32
77
2
81
48
16
8
26
1.75

Tables:   1

The End!