Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011463.1 Corchorus olitorius cultivar O-4 contig11496, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2597

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--406
154
2.6
153
87
2
580
21
18
19
40
1.92
300--619
107
3.0
107
93
1
545
22
19
18
40
1.91
514--928
154
2.7
153
89
2
625
22
19
17
40
1.91
1--1038
522
2.0
522
93
1
1767
22
18
18
40
1.91
822--1038
107
2.0
107
98
0
416
22
19
17
41
1.91
1036--1431
153
2.6
153
92
1
672
21
17
19
41
1.90

Tables:   1

The End!