Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011489.1 Corchorus olitorius cultivar O-4 contig11522, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17079

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1854--1905
22
2.4
22
80
6
61
75
3
11
9
1.18
4404--4480
37
2.1
38
83
9
99
18
11
9
61
1.56
8666--8705
2
20.0
2
94
0
71
50
2
0
47
1.14
9643--9856
43
4.9
43
74
7
182
50
2
8
37
1.46
9953--9985
16
2.1
16
94
0
57
69
3
0
27
1.03
10921--10956
15
2.4
15
100
0
72
52
8
22
16
1.70
12902--12946
21
2.2
21
92
4
74
40
22
8
28
1.84
16146--16175
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!